#!/usr/bin/env cwl-runner cwlVersion: v1.0 class: CommandLineTool label: echo doc: | NCBI BlastN Nucleotide-Nucleotide BLAST requirements: InlineJavascriptRequirement: {} ResourceRequirement: coresMax: 3 ramMax: 10240 hints: DockerRequirement: dockerPull: busybox:1.36 SoftwareRequirement: packages: blast: specs: [ https://bio.tools/blast ] version: [ "2.15.0" ] arguments: - valueFrom: $(runtime.cores) position: 2 inputs: message: type: string # A default value that can be overridden, e.g. --message "Hola mundo" default: "Hello World" # Bind this message value as an argument to "echo". inputBinding: position: 1 outputs: [] baseCommand: ["echo"]
[root@bios cellxgene]# cwltool --strict-cpu-limit --strict-memory-limit cc.cwl INFO /usr/local/bin/cwltool 3.1.20230719185429 INFO Resolved 'cc.cwl' to 'file:///opt/zcy/cellxgene/cc.cwl' INFO [job cc.cwl] /tmp/wpft111o$ docker \ run \ -i \ --mount=type=bind,source=/tmp/wpft111o,target=/cBJKeD \ --mount=type=bind,source=/tmp/j8qmvbwa,target=/tmp \ --workdir=/cBJKeD \ --read-only=true \ --user=0:0 \ --rm \ --cidfile=/tmp/xvi2z5wk/20240903113406-036800.cid \ --env=TMPDIR=/tmp \ --env=HOME=/cBJKeD \ --memory=10240m \ --cpus=3 \ busybox:1.36 \ echo \ 'Hello World' \ 3 Hello World 3 INFO [job cc.cwl] Max memory used: 0MiB INFO [job cc.cwl] completed success {}INFO Final process status is success
标签:tmp,INFO,--,echo,cc,cwl,docker From: https://www.cnblogs.com/testzcy/p/18394235